Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_02990Hypothetical protein. (112 aa)    
Predicted Functional Partners:
tadA
Cytidine and deoxycytidylate deaminase zinc-binding region; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
       0.991
D920_02993
Putative neutral zinc metallopeptidase; KEGG: efc:EFAU004_02238 6.5e-102 Zn-dependent protease K06973; Psort location: CytoplasmicMembrane, score: 10.00.
       0.991
D920_02994
KEGG: efi:OG1RF_11162 3.1e-47 phnA; alkylphosphonate uptake protein; K06193 phosphonoacetate hydrolase.
       0.989
D920_01778
Hypothetical protein.
       0.980
D920_02991
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.921
D920_02786
Hypothetical protein.
       0.906
D920_02996
DRTGG domain protein; KEGG: bya:BANAU_2851 1.1e-108 ytoI; Inosine-5'-monophosphate dehydrogenase IMP dehydrogenase; Psort location: Cytoplasmic, score: 7.50.
 
     0.842
D920_01113
Methyltransferase small domain protein; KEGG: efu:HMPREF0351_10036 1.8e-90 rsmC; methyltransferase K00564; Psort location: Cytoplasmic, score: 7.50.
       0.832
D920_02995
DHHA1 domain protein; KEGG: efu:HMPREF0351_12223 1.8e-131 phosphoesterase K06881; Psort location: Cytoplasmic, score: 7.50.
       0.796
D920_00809
Hypothetical protein; KEGG: efc:EFAU004_01232 4.4e-286 ysyl-tRNA synthetase K14205; Psort location: CytoplasmicMembrane, score: 10.00.
       0.781
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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