Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_03016Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (124 aa)    
Predicted Functional Partners:
gpsA
KEGG: efc:EFAU004_02253 4.9e-152 gpsA; glycerol-3-phosphate dehydrogenase K00057; Psort location: Cytoplasmic, score: 7.50; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
       0.866
gpsA-2
KEGG: efu:HMPREF0351_12237 1.2e-155 gpsA2; glycerol-3-phosphate dehydrogenase (NAD(P)(+)) K00057; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
       0.866
D920_00038
KEGG: efa:EF1746 4.3e-112 galU; UTP-glucose-1-phosphate uridylyltransferase; K00963 UTP--glucose-1-phosphate uridylyltransferase; Psort location: Cytoplasmic, score: 7.50.
       0.670
D920_00697
KEGG: efc:EFAU004_02021 1.5e-118 UTP-glucose-1-phosphate uridylyltransferase K00963; Psort location: Cytoplasmic, score: 7.50.
       0.670
D920_02218
KEGG: thl:TEH_21040 2.9e-115 galU; UTP--glucose-1-phosphate uridylyltransferase; Psort location: Cytoplasmic, score: 7.50.
       0.670
D920_02939
KEGG: efa:EF1746 4.0e-125 galU; UTP-glucose-1-phosphate uridylyltransferase; K00963 UTP--glucose-1-phosphate uridylyltransferase; Psort location: Cytoplasmic, score: 7.50.
       0.670
D920_03015
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.628
D920_03017
SIS domain protein; Catalyzes the conversion of a range of fructosamine 6- phosphates to glucose 6-phosphate and a free amino acid.
       0.401
D920_03018
SIS domain protein; KEGG: efu:HMPREF0351_12239 2.2e-110 glutamine--fructose-6-phosphate transaminase (isomerizing); Psort location: Cytoplasmic, score: 9.97.
       0.401
D920_03019
KEGG: efu:HMPREF0351_12240 6.1e-122 PTS system mannose/fructose/sorbose transporter subunit IID K02796; Psort location: CytoplasmicMembrane, score: 10.00.
       0.401
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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