Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_03045Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (505 aa)    
Predicted Functional Partners:
D920_03043
Putative bacteriocin export ABC transporter; KEGG: snc:HMPREF0837_12256 3.0e-40 ABC transporter ATP-binding protein K02003; Psort location: CytoplasmicMembrane, score: 8.78.
     
 0.956
D920_03002
KEGG: sgg:SGGBAA2069_c09990 5.0e-63 yclH; putative ABC transporter ATP-binding protein K02003; Psort location: CytoplasmicMembrane, score: 9.99.
     
 0.895
D920_02916
KEGG: snc:HMPREF0837_12256 5.9e-21 ABC transporter ATP-binding protein K02003; Psort location: CytoplasmicMembrane, score: 8.78.
 
   
 0.842
D920_01398
Lipoyltransferase and lipoate-protein ligase; KEGG: efu:HMPREF0351_10758 1.5e-150 lplA; lipoate--protein ligase K03800; Psort location: Cytoplasmic, score: 9.97.
       0.835
D920_00491
Putative bacteriocin export ABC transporter; KEGG: llk:LLKF_0011 7.5e-53 yabE; ABC transporter ATP-binding protein K02003; Psort location: CytoplasmicMembrane, score: 8.78.
     
 0.821
D920_01420
Putative lipoprotein releasing system, ATP-binding protein; KEGG: ppo:PPM_p0087 2.5e-36 metN4; methionine import ATP-binding protein metN; Psort location: CytoplasmicMembrane, score: 9.96.
     
 0.821
D920_01620
Putative bacteriocin export ABC transporter; KEGG: llk:LLKF_0011 4.3e-41 yabE; ABC transporter ATP-binding protein K02003; Psort location: CytoplasmicMembrane, score: 9.51.
     
 0.821
D920_02917
Hypothetical protein; KEGG: xbo:XBJ1_2840 3.3e-11 lolD; transporter of outer membrane lipoproteins (ABC superfamily, atp_bind); K09810 lipoprotein-releasing system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.51.
     
 0.821
D920_03044
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.768
D920_02551
KEGG: efi:OG1RF_11143 4.3e-231 aceF; pyruvate dehydrogenase complex E2, dihydrolipoamide acetyltransferase K00627; Psort location: Cytoplasmic, score: 9.67.
       0.711
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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