Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_03086Hydrolase, NUDIX family; KEGG: efu:HMPREF0351_10543 1.1e-76 nudF; ADP-ribose diphosphatase K01515; Psort location: Cytoplasmic, score: 7.50. (187 aa)    
Predicted Functional Partners:
D920_01967
Pyruvate synthase; KEGG: efu:HMPREF0351_11628 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.999
mtnN
MTA/SAH nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.
  
  
 0.998
D920_03085
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.997
D920_03083
Isochorismatase family protein; KEGG: efu:HMPREF0351_10546 1.3e-78 nicotinamidase/isochorismatase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.996
rnr
Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.
  
 0.995
D920_03088
Toxic anion resistance protein TelA; KEGG: pgu:PGUG_00649 5.1e-06 hypothetical protein; K10866 DNA repair protein RAD50; Psort location: Cytoplasmic, score: 7.50; Belongs to the TelA family.
  
    0.995
D920_03087
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.994
D920_01285
KEGG: efl:EF62_0786 1.2e-86 dapF; diaminopimelate epimerase K01778; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.993
D920_01522
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
 
 0.993
cinA
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 1.5e-16 fadD; long-chain-fatty-acid--CoA ligase K03743; Belongs to the CinA family.
     
 0.993
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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