Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_03092Putative response regulator protein GraR; KEGG: bbp:BBPR_1604 2.2e-30 two-component response regulator K07776; Psort location: Cytoplasmic, score: 9.97. (233 aa)    
Predicted Functional Partners:
D920_03091
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: efc:EFAU004_00525 2.5e-141 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 9.99.
 
 0.999
D920_01772
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: efc:EFAU004_00426 1.2e-114 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 8.78.
 
 
 0.991
D920_02733
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: efu:HMPREF0351_11844 6.7e-203 sensor histidine kinase K07636; Psort location: CytoplasmicMembrane, score: 8.78.
 
 
 0.986
D920_03095
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.986
D920_02067
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: efu:HMPREF0351_11400 1.7e-156 ciaH; sensor histidine kinase K14982; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.983
D920_02299
Putative sensor protein kinase WalK; KEGG: efu:HMPREF0351_12361 1.2e-292 vicK; sensor histidine kinase VicK K07652; Psort location: CytoplasmicMembrane, score: 9.96.
 
 
 0.983
D920_03090
Putative glucose uptake protein GlcU; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.979
D920_02296
Metallo-beta-lactamase domain protein; KEGG: efi:OG1RF_10969 7.1e-112 beta-lactamase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.976
D920_01148
KEGG: efc:EFAU004_02694 6.8e-75 sensor histidine kinase.
 
 
 0.975
D920_00749
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: efc:EFAU004_01792 2.0e-217 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.969
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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