Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_03095Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55. (67 aa)    
Predicted Functional Partners:
D920_03091
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: efc:EFAU004_00525 2.5e-141 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 9.99.
       0.988
D920_03092
Putative response regulator protein GraR; KEGG: bbp:BBPR_1604 2.2e-30 two-component response regulator K07776; Psort location: Cytoplasmic, score: 9.97.
       0.986
argR-3
Arginine repressor protein; Regulates arginine biosynthesis genes.
       0.986
D920_03097
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.948
D920_01622
KEGG: efc:EFAU004_00597 9.3e-39 MazG nucleotide pyrophosphohydrolase; Psort location: Cytoplasmic, score: 7.50.
       0.935
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
       0.835
argR-2
Arginine repressor protein; Regulates arginine biosynthesis genes.
       0.815
D920_03094
KEGG: efc:EFAU004_00502 1.2e-54 peroxiredoxin, Ohr family protein; Psort location: Cytoplasmic, score: 7.50.
       0.797
D920_03090
Putative glucose uptake protein GlcU; Psort location: CytoplasmicMembrane, score: 10.00.
       0.772
D920_03089
Amino acid permease; KEGG: sgg:SGGBAA2069_c08160 3.6e-124 basic amino acid/polyamine antiporter K03294; Psort location: CytoplasmicMembrane, score: 10.00.
       0.661
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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