Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_03124KEGG: efc:EFAU004_01412 2.3e-145 N-acetylmuramoyl-L-alanine amidase; Psort location: Extracellular, score: 9.73. (335 aa)    
Predicted Functional Partners:
D920_01313
Methyltransferase domain protein; KEGG: efu:HMPREF0351_10904 4.1e-203 methyltransferase; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.935
D920_00133
KEGG: ssp:SSP0282 7.6e-44 glutamyl endopeptidase precursor; K01318 glutamyl endopeptidase; Psort location: Extracellular, score: 9.72; Belongs to the peptidase S1B family.
  
  
 0.918
D920_01818
Toxin secretion/phage lysis holin; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.912
D920_02317
Mg2+ transporter-C family protein; KEGG: hip:CGSHiEE_08975 1.2e-22 coaD; phosphopantetheine adenylyltransferase K07507; Psort location: CytoplasmicMembrane, score: 9.35.
       0.904
D920_01512
NlpC/P60 family protein; KEGG: efc:EFAU004_00439 2.9e-46 N-acetylmuramoyl-L-alanine amidase; Psort location: Extracellular, score: 9.98.
 
  
 0.903
D920_02925
Hypothetical protein; KEGG: llk:LLKF_0896 7.4e-30 yijG; family 2 glycosyltransferase; Psort location: CytoplasmicMembrane, score: 9.55.
 
  
 0.902
D920_00966
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.890
D920_01476
Acyltransferase; KEGG: thl:TEH_09440 1.7e-76 putative acyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.885
D920_02924
Glycosyltransferase, group 2 family protein; KEGG: llk:LLKF_0896 2.9e-122 yijG; family 2 glycosyltransferase; Psort location: CytoplasmicMembrane, score: 9.99.
 
  
 0.883
D920_00290
Toxin secretion/phage lysis holin.
     
 0.867
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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