STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ywtFCell envelope-like function transcriptional attenuator common domain protein; Psort location: CytoplasmicMembrane, score: 9.68. (348 aa)    
Predicted Functional Partners:
KXI14832.1
Cof-like hydrolase; KEGG: ccm:Ccan_15530 6.5e-38 phosphatase ybjI K07024; Psort location: Cytoplasmic, score: 7.50.
       0.506
KXI14834.1
Cell envelope-like function transcriptional attenuator common domain protein; Psort location: CytoplasmicMembrane, score: 9.68.
 
    
0.462
comEA
comEA protein; KEGG: hor:Hore_06940 1.7e-10 glycogen/starch synthase K00703; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.460
KXI14831.1
KEGG: cdl:CDR20291_2649 3.5e-23 N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase.
       0.445
KXI10906.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bmd:BMD_0210 4.0e-54 two-component sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 9.51.
  
     0.422
KXI14424.1
SH3 domain protein; KEGG: cbh:CLC_3015 1.3e-40 beta-N-acetylglucosaminidase; Psort location: Extracellular, score: 9.72.
 
     0.413
KXI13029.1
r3H domain protein; KEGG: sgg:SGGBAA2069_c20720 6.9e-13 jag; Jag family RNA-binding protein K06346; Psort location: Cytoplasmic, score: 7.50.
  
     0.408
Your Current Organism:
Peptostreptococcus anaerobius
NCBI taxonomy Id: 1261
Other names: ATCC 27337, CCUG 7835, CIP 104411, DSM 2949, LMG 15865, LMG:15865, NCTC 11460, P. anaerobius, Streptococcus anaerob, Streptococcus anaerobius, VPI 4330
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