STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXI14856.1YbaK/EbsC protein; KEGG: bya:BANAU_2580 2.2e-37 yjdI; prolyl-tRNA synthetase K03976; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. (161 aa)    
Predicted Functional Partners:
KXI14853.1
KEGG: cdf:CD1005 1.9e-143 NAD-dependent malic enzyme K00027; Psort location: Cytoplasmic, score: 7.50.
       0.762
KXI14854.1
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type; KEGG: cdg:CDBI1_04500 3.0e-65 fumarate hydratase subunit B; K01678 fumarate hydratase subunit beta; Psort location: Cytoplasmic, score: 7.50.
       0.762
KXI14855.1
Hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type; KEGG: cdf:CD1003 6.8e-107 fumA; fumarate hydratase K01677; Psort location: Cytoplasmic, score: 7.50.
       0.762
KXI14857.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.757
KXI14852.1
Hypothetical protein; KEGG: mai:MICA_2002 4.7e-28 3-deoxy-7-phosphoheptulonate synthase K00243; Belongs to the CvfB family.
       0.622
KXI14858.1
S1 RNA binding domain protein; KEGG: fma:FMG_0826 1.2e-54 fused penicillin tolerance LytB domain-containing protein/30S ribosomal protein S1; K02945 small subunit ribosomal protein S1; K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Psort location: Cytoplasmic, score: 9.97.
       0.465
lysS
lysine--tRNA ligase; KEGG: fma:FMG_0987 2.4e-223 lysyl-tRNA synthetase class II; K04567 lysyl-tRNA synthetase, class II; Psort location: Cytoplasmic, score: 10.00; Belongs to the class-II aminoacyl-tRNA synthetase family.
     
 0.436
proS
proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).
     
 0.404
Your Current Organism:
Peptostreptococcus anaerobius
NCBI taxonomy Id: 1261
Other names: ATCC 27337, CCUG 7835, CIP 104411, DSM 2949, LMG 15865, LMG:15865, NCTC 11460, P. anaerobius, Streptococcus anaerob, Streptococcus anaerobius, VPI 4330
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