STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXI14873.1rSAM-modified six-cysteine peptide; Psort location: Extracellular, score: 8.91. (52 aa)    
Predicted Functional Partners:
KXI14825.1
six-Cys-in-45 modification radical SAM protein; KEGG: mcj:MCON_2732 1.3e-15 anaerobic sulfatase-maturating protein K06871; Psort location: Cytoplasmic, score: 7.50.
 
 
 
 0.997
yajC
Preprotein translocase, YajC subunit; KEGG: apb:SAR116_0407 1.1e-10 YajC K03210; Psort location: CytoplasmicMembrane, score: 9.99.
       0.687
tgt
tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...]
       0.594
KXI14871.1
Arylsulfatase; KEGG: bmq:BMQ_0208 2.5e-44 sulfatase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.584
KXI14872.1
Putative cell wall binding repeat 2; KEGG: cbj:H04402_00392 1.4e-33 N-acetylmuramoyl-L-alanine amidase; Psort location: Cellwall, score: 9.17.
       0.584
queA
S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).
       0.497
ruvB
Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
       0.485
ruvA
Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.
       0.480
KXI13830.1
Orn/Lys/Arg decarboxylase, major domain protein; KEGG: cdf:CD3551 8.9e-105 speA; arginine decarboxylase K01585; Psort location: Cytoplasmic, score: 9.97.
 
     0.414
Your Current Organism:
Peptostreptococcus anaerobius
NCBI taxonomy Id: 1261
Other names: ATCC 27337, CCUG 7835, CIP 104411, DSM 2949, LMG 15865, LMG:15865, NCTC 11460, P. anaerobius, Streptococcus anaerob, Streptococcus anaerobius, VPI 4330
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