STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
porC2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family; KEGG: cdg:CDBI1_00660 7.2e-71 subunit of oxidoreductase; K00177 2-oxoglutarate ferredoxin oxidoreductase subunit gamma. (185 aa)    
Predicted Functional Partners:
KXI14740.1
Thiamine pyrophosphate enzyme, TPP binding domain protein; KEGG: cdf:CD0117 3.8e-104 subunit of oxidoreductase; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Psort location: Cytoplasmic, score: 7.50.
 0.999
KXI13238.1
Pyruvate synthase; KEGG: cdc:CD196_2523 0. nifJ; pyruvate-flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
  
0.999
porA_1
3-methyl-2-oxobutanoate dehydrogenase; KEGG: cdg:CDBI1_00650 5.3e-139 2-ketoisovalerate ferredoxin reductase K00174; Psort location: Cytoplasmic, score: 7.50.
 
 0.998
KXI14742.1
4Fe-4S binding domain protein; KEGG: cdg:CDBI1_00645 2.7e-23 ferredoxin; K00176 2-oxoglutarate ferredoxin oxidoreductase subunit delta; Psort location: Cytoplasmic, score: 7.50.
 
 
  0.990
rnfB
Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 0.972
KXI14743.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.902
purB
Adenylosuccinate lyase; KEGG: ccl:Clocl_1803 1.4e-179 adenylosuccinate lyase; K01756 adenylosuccinate lyase; Psort location: Cytoplasmic, score: 7.50.
    
  0.900
KXI11772.1
KEGG: cdf:CD0179 4.7e-186 gluD; NAD-specific glutamate dehydrogenase K00260; Psort location: Cytoplasmic, score: 9.97; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
 0.900
KXI14323.1
Glutamate synthase; KEGG: faa:HMPREF0389_00044 1.7e-197 glutamate synthase (NADPH), homotetrameric; K00266 glutamate synthase (NADPH/NADH) small chain; Psort location: Cytoplasmic, score: 9.97.
  
 
  0.874
KXI12467.1
Pyruvate kinase; KEGG: cdl:CDR20291_3216 3.2e-210 pykF; pyruvate kinase; K00873 pyruvate kinase; Psort location: Cytoplasmic, score: 7.50.
    
 0.817
Your Current Organism:
Peptostreptococcus anaerobius
NCBI taxonomy Id: 1261
Other names: ATCC 27337, CCUG 7835, CIP 104411, DSM 2949, LMG 15865, LMG:15865, NCTC 11460, P. anaerobius, Streptococcus anaerob, Streptococcus anaerobius, VPI 4330
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