STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXI14628.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (123 aa)    
Predicted Functional Partners:
KXI14629.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.773
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.747
rpoC
DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.740
KXI13017.1
KEGG: cdl:CDR20291_3551 9.9e-35 rsbW; anti-sigma-B factor (serine-protein kinase); K04757 anti-sigma B factor; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.653
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.594
KXI14627.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.545
KXI14626.1
Hypothetical protein.
       0.538
KXI14625.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.524
KXI14630.1
Hypothetical protein; KEGG: tte:TTE1295 0.0052 XseB; exonuclease VII small subunit; K03602 exodeoxyribonuclease VII small subunit; Psort location: Cytoplasmic, score: 7.50.
       0.511
KXI14631.1
KEGG: shn:Shewana3_3590 2.7e-12 single-strand binding protein K03111; Psort location: Cytoplasmic, score: 9.67.
       0.509
Your Current Organism:
Peptostreptococcus anaerobius
NCBI taxonomy Id: 1261
Other names: ATCC 27337, CCUG 7835, CIP 104411, DSM 2949, LMG 15865, LMG:15865, NCTC 11460, P. anaerobius, Streptococcus anaerob, Streptococcus anaerobius, VPI 4330
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.