STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXI14461.1KEGG: cdg:CDBI1_16040 9.8e-51 hypothetical protein; K00805 heptaprenyl diphosphate synthase; Psort location: CytoplasmicMembrane, score: 10.00. (188 aa)    
Predicted Functional Partners:
KXI13517.1
KEGG: cdc:CD196_1065 2.8e-101 ispA; geranyltranstransferase; K13789 geranylgeranyl diphosphate synthase, type II; Psort location: Cytoplasmic, score: 9.97; Belongs to the FPP/GGPP synthase family.
  
 
 0.924
KXI13728.1
KEGG: sth:STH903 4.5e-08 hypothetical protein; K00805 heptaprenyl diphosphate synthase.
 
    0.916
apbE
ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
   
 0.835
KXI13070.1
Ser/Thr phosphatase family protein; KEGG: lcb:LCABL_10090 9.4e-30 cpdA; 3, 5-cyclic-nucleotide phosphodiesterase; Psort location: Cytoplasmic, score: 7.50.
  
     0.491
rnfD
Electron transport complex, RnfABCDGE type, D subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.
 
     0.486
KXI14462.1
KEGG: cdf:CD3269 7.6e-218 pepF; endopeptidase; K08602 oligoendopeptidase F; Psort location: Cytoplasmic, score: 9.97.
       0.481
rnfG
Electron transport complex, RnfABCDGE type, G subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.
 
     0.472
KXI14463.1
Sigma-54 interaction domain protein; KEGG: cbi:CLJ_B0032 9.8e-67 megL; methionine gamma-lyase K01761; Psort location: Cytoplasmic, score: 9.97.
       0.468
rnfB
Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
 
     0.433
Your Current Organism:
Peptostreptococcus anaerobius
NCBI taxonomy Id: 1261
Other names: ATCC 27337, CCUG 7835, CIP 104411, DSM 2949, LMG 15865, LMG:15865, NCTC 11460, P. anaerobius, Streptococcus anaerob, Streptococcus anaerobius, VPI 4330
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.