STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXI14462.1KEGG: cdf:CD3269 7.6e-218 pepF; endopeptidase; K08602 oligoendopeptidase F; Psort location: Cytoplasmic, score: 9.97. (594 aa)    
Predicted Functional Partners:
KXI14463.1
Sigma-54 interaction domain protein; KEGG: cbi:CLJ_B0032 9.8e-67 megL; methionine gamma-lyase K01761; Psort location: Cytoplasmic, score: 9.97.
       0.773
KXI14461.1
KEGG: cdg:CDBI1_16040 9.8e-51 hypothetical protein; K00805 heptaprenyl diphosphate synthase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.481
KXI14464.1
Hypothetical protein.
       0.422
KXI14465.1
Hypothetical protein; KEGG: zga:zobellia_3544 3.1e-06 sdaA1; L-serine dehydratase K01752; Psort location: Cytoplasmic, score: 9.97; Belongs to the UPF0597 family.
       0.422
KXI13245.1
Hypothetical protein; KEGG: sia:M1425_0251 0.0096 DEAD/DEAH box helicase; K03726 helicase.
  
 
   0.418
KXI11269.1
KEGG: eha:Ethha_0637 4.5e-94 riboflavin biosynthesis protein RibD K11752; Psort location: Cytoplasmic, score: 7.50.
   
    0.412
Your Current Organism:
Peptostreptococcus anaerobius
NCBI taxonomy Id: 1261
Other names: ATCC 27337, CCUG 7835, CIP 104411, DSM 2949, LMG 15865, LMG:15865, NCTC 11460, P. anaerobius, Streptococcus anaerob, Streptococcus anaerobius, VPI 4330
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