STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXI14481.1Hypothetical protein. (50 aa)    
Predicted Functional Partners:
KXI14482.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.762
KXI13239.1
Stage II sporulation protein E; KEGG: lbi:LEPBI_I1575 6.2e-23 putative phosphodiesterase or phosphatase K07315.
  
 
 0.691
prs
Ribose-phosphate diphosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
    
 0.691
ribBA
GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.644
KXI12467.1
Pyruvate kinase; KEGG: cdl:CDR20291_3216 3.2e-210 pykF; pyruvate kinase; K00873 pyruvate kinase; Psort location: Cytoplasmic, score: 7.50.
   
  0.636
KXI14466.1
Putative response regulator protein GraR; KEGG: bde:BDP_0775 1.4e-28 two-component response regulator K02483; Psort location: Cytoplasmic, score: 9.97.
   
  0.553
KXI14475.1
Putative DNA-binding response regulator MtrA; KEGG: pmb:A9601_01511 2.5e-36 two-component response regulator K11329; Psort location: Cytoplasmic, score: 9.97.
   
  0.553
KXI13747.1
KEGG: bde:BDP_0386 1.0e-39 vicR; response regulator protein Vicr K07776; Psort location: Cytoplasmic, score: 9.97.
   
  0.553
yycF_1
Putative transcriptional regulatory protein WalR; KEGG: bde:BDP_0386 2.0e-45 vicR; response regulator protein Vicr K07776; Psort location: Cytoplasmic, score: 9.97.
   
  0.553
regX3_1
Response regulator receiver domain protein; KEGG: bbp:BBPR_1604 3.6e-30 two-component response regulator K07776; Psort location: Cytoplasmic, score: 9.97.
   
  0.553
Your Current Organism:
Peptostreptococcus anaerobius
NCBI taxonomy Id: 1261
Other names: ATCC 27337, CCUG 7835, CIP 104411, DSM 2949, LMG 15865, LMG:15865, NCTC 11460, P. anaerobius, Streptococcus anaerob, Streptococcus anaerobius, VPI 4330
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