STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msrAmethionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (314 aa)    
Predicted Functional Partners:
dsbE
Redoxin family protein; KEGG: aca:ACP_1678 2.7e-10 thiol-disulfide oxidoreductase.
   
 0.999
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
  
 0.978
KXI10594.1
Cytochrome C biogenesis protein transmembrane region; KEGG: ccu:Ccur_04460 5.1e-47 methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase; K12267 peptide methionine sulfoxide reductase msrA/msrB; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.909
rplT
Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 
 0.863
rplL
Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.
    
 
 0.846
clpX
ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.
  
 
 0.845
rpmB
Ribosomal protein L28; KEGG: apb:SAR116_1905 0.0023 50S ribosomal protein L28 K02902; Psort location: Cytoplasmic, score: 9.67; Belongs to the bacterial ribosomal protein bL28 family.
    
   0.844
rpmJ
Ribosomal protein L36; Psort location: Cytoplasmic, score: 9.67; Belongs to the bacterial ribosomal protein bL36 family.
    
   0.844
rpmG2
Ribosomal protein L33; KEGG: mmo:MMOB5490 5.0e-08 rpmG; 50S ribosomal protein L33 K02913; Belongs to the bacterial ribosomal protein bL33 family.
    
   0.844
rpsP
Ribosomal protein S16; KEGG: apb:SAR116_1817 3.8e-17 30S ribosomal protein S16 K02959; Psort location: Cytoplasmic, score: 9.95; Belongs to the bacterial ribosomal protein bS16 family.
    
   0.844
Your Current Organism:
Peptostreptococcus anaerobius
NCBI taxonomy Id: 1261
Other names: ATCC 27337, CCUG 7835, CIP 104411, DSM 2949, LMG 15865, LMG:15865, NCTC 11460, P. anaerobius, Streptococcus anaerob, Streptococcus anaerobius, VPI 4330
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