Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXI14322.1 | KXI14323.1 | HMPREF3195_00294 | HMPREF3195_00295 | Oxidoreductase NAD-binding domain protein; KEGG: faa:HMPREF0389_00043 1.4e-115 oxidoreductase; K00528 ferredoxin--NADP+ reductase; Psort location: Cytoplasmic, score: 9.97. | Glutamate synthase; KEGG: faa:HMPREF0389_00044 1.7e-197 glutamate synthase (NADPH), homotetrameric; K00266 glutamate synthase (NADPH/NADH) small chain; Psort location: Cytoplasmic, score: 9.97. | 0.999 |
KXI14322.1 | KXI14324.1 | HMPREF3195_00294 | HMPREF3195_00296 | Oxidoreductase NAD-binding domain protein; KEGG: faa:HMPREF0389_00043 1.4e-115 oxidoreductase; K00528 ferredoxin--NADP+ reductase; Psort location: Cytoplasmic, score: 9.97. | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55. | 0.415 |
KXI14323.1 | KXI14322.1 | HMPREF3195_00295 | HMPREF3195_00294 | Glutamate synthase; KEGG: faa:HMPREF0389_00044 1.7e-197 glutamate synthase (NADPH), homotetrameric; K00266 glutamate synthase (NADPH/NADH) small chain; Psort location: Cytoplasmic, score: 9.97. | Oxidoreductase NAD-binding domain protein; KEGG: faa:HMPREF0389_00043 1.4e-115 oxidoreductase; K00528 ferredoxin--NADP+ reductase; Psort location: Cytoplasmic, score: 9.97. | 0.999 |
KXI14323.1 | KXI14324.1 | HMPREF3195_00295 | HMPREF3195_00296 | Glutamate synthase; KEGG: faa:HMPREF0389_00044 1.7e-197 glutamate synthase (NADPH), homotetrameric; K00266 glutamate synthase (NADPH/NADH) small chain; Psort location: Cytoplasmic, score: 9.97. | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55. | 0.415 |
KXI14324.1 | KXI14322.1 | HMPREF3195_00296 | HMPREF3195_00294 | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55. | Oxidoreductase NAD-binding domain protein; KEGG: faa:HMPREF0389_00043 1.4e-115 oxidoreductase; K00528 ferredoxin--NADP+ reductase; Psort location: Cytoplasmic, score: 9.97. | 0.415 |
KXI14324.1 | KXI14323.1 | HMPREF3195_00296 | HMPREF3195_00295 | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55. | Glutamate synthase; KEGG: faa:HMPREF0389_00044 1.7e-197 glutamate synthase (NADPH), homotetrameric; K00266 glutamate synthase (NADPH/NADH) small chain; Psort location: Cytoplasmic, score: 9.97. | 0.415 |
KXI14324.1 | KXI14325.1 | HMPREF3195_00296 | HMPREF3195_00297 | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55. | Hypothetical protein. | 0.494 |
KXI14325.1 | KXI14324.1 | HMPREF3195_00297 | HMPREF3195_00296 | Hypothetical protein. | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55. | 0.494 |