Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXI10528.1 | KXI14036.1 | HMPREF3195_01847 | HMPREF3195_00367 | Acyltransferase; KEGG: ppo:PPM_2023 2.6e-10 vanT; serine/alanine racemase Vancomycin C-type resistance protein vanT; Psort location: CytoplasmicMembrane, score: 10.00. | CsbD-like protein; KEGG: ssr:SALIVB_0754 6.0e-12 putative manganese-dependent inorganic pyrophosphatase; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0337 (CsbD) family. | 0.487 |
KXI10833.1 | KXI14036.1 | HMPREF3195_01575 | HMPREF3195_00367 | KEGG: bmq:BMQ_1760 5.1e-15 Transglycosylase associated protein; Psort location: CytoplasmicMembrane, score: 10.00. | CsbD-like protein; KEGG: ssr:SALIVB_0754 6.0e-12 putative manganese-dependent inorganic pyrophosphatase; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0337 (CsbD) family. | 0.428 |
KXI13734.1 | KXI14036.1 | HMPREF3195_00537 | HMPREF3195_00367 | Acetyltransferase, GNAT family; KEGG: lcb:LCABL_25110 1.1e-10 wecD; acetyltransferase K06975; Psort location: Cytoplasmic, score: 7.50. | CsbD-like protein; KEGG: ssr:SALIVB_0754 6.0e-12 putative manganese-dependent inorganic pyrophosphatase; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0337 (CsbD) family. | 0.553 |
KXI14036.1 | KXI10528.1 | HMPREF3195_00367 | HMPREF3195_01847 | CsbD-like protein; KEGG: ssr:SALIVB_0754 6.0e-12 putative manganese-dependent inorganic pyrophosphatase; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0337 (CsbD) family. | Acyltransferase; KEGG: ppo:PPM_2023 2.6e-10 vanT; serine/alanine racemase Vancomycin C-type resistance protein vanT; Psort location: CytoplasmicMembrane, score: 10.00. | 0.487 |
KXI14036.1 | KXI10833.1 | HMPREF3195_00367 | HMPREF3195_01575 | CsbD-like protein; KEGG: ssr:SALIVB_0754 6.0e-12 putative manganese-dependent inorganic pyrophosphatase; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0337 (CsbD) family. | KEGG: bmq:BMQ_1760 5.1e-15 Transglycosylase associated protein; Psort location: CytoplasmicMembrane, score: 10.00. | 0.428 |
KXI14036.1 | KXI13734.1 | HMPREF3195_00367 | HMPREF3195_00537 | CsbD-like protein; KEGG: ssr:SALIVB_0754 6.0e-12 putative manganese-dependent inorganic pyrophosphatase; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0337 (CsbD) family. | Acetyltransferase, GNAT family; KEGG: lcb:LCABL_25110 1.1e-10 wecD; acetyltransferase K06975; Psort location: Cytoplasmic, score: 7.50. | 0.553 |