STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
comEAcomEA protein; KEGG: hor:Hore_06940 1.7e-10 glycogen/starch synthase K00703; Psort location: CytoplasmicMembrane, score: 10.00. (243 aa)    
Predicted Functional Partners:
cinA
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 1.6e-17 fadD; long-chain-fatty-acid--CoA ligase K03743; Psort location: Cytoplasmic, score: 7.50; Belongs to the CinA family.
     
 0.786
KXI11426.1
Bacterial type II secretion system protein F domain protein; KEGG: pfe:PSF113_5005 4.5e-39 pilC; protein PilC K02653; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.738
KXI11427.1
Type II/IV secretion system protein; KEGG: cco:CCC13826_1231 9.1e-64 L(+)-tartrate dehydratase subunit beta (L-TTD beta) K02454; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.686
coaD
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
      0.610
KXI12449.1
Hypothetical protein.
  
  
 0.574
KXI14042.1
Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: cdf:CD2498 1.4e-90 D-alanyl-D-alanine carboxypeptidase K07258; Psort location: CytoplasmicMembrane, score: 9.68; Belongs to the peptidase S11 family.
       0.571
KXI14834.1
Cell envelope-like function transcriptional attenuator common domain protein; Psort location: CytoplasmicMembrane, score: 9.68.
 
     0.494
recA
RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
      
 0.483
KXI14040.1
KEGG: cdg:CDBI1_02485 2.1e-96 ornithine cyclodeaminase K01750; Psort location: Cytoplasmic, score: 7.50.
       0.482
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
       0.480
Your Current Organism:
Peptostreptococcus anaerobius
NCBI taxonomy Id: 1261
Other names: ATCC 27337, CCUG 7835, CIP 104411, DSM 2949, LMG 15865, LMG:15865, NCTC 11460, P. anaerobius, Streptococcus anaerob, Streptococcus anaerobius, VPI 4330
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