STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hcrCKEGG: pth:PTH_1579 4.2e-59 CoxS; aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs; K03518 carbon-monoxide dehydrogenase small subunit; Psort location: Cytoplasmic, score: 7.50. (161 aa)    
Predicted Functional Partners:
hcrA
KEGG: gem:GM21_2835 9.7e-163 4-hydroxybenzoyl-CoA reductase subunit alpha; K04108 4-hydroxybenzoyl-CoA reductase subunit alpha; Psort location: CytoplasmicMembrane, score: 8.78.
 0.999
ndhF
KEGG: aar:Acear_0459 6.6e-45 molybdopterin dehydrogenase FAD-binding protein; K03519 carbon-monoxide dehydrogenase medium subunit; Psort location: Cytoplasmic, score: 7.50.
 0.999
glmU_1
Transcriptional regulator, LysR family; KEGG: aar:Acear_0475 5.3e-20 4-diphosphocytidyl-2-C-methyl-D-erythritol synthase; K07141 molybdenum cofactor cytidylyltransferase; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.926
KXI13977.1
Putative xanthine dehydrogenase accessory factor; KEGG: gfo:GFO_0448 1.0e-23 XdhC/CoxI type molybdenum-dependent oxidoreductase accessory protein K00540; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.921
rnfB
Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
    
 0.802
KXI13963.1
HD domain protein; KEGG: sfu:Sfum_1317 1.4e-14 metal dependent phosphohydrolase; K15634 probable phosphoglycerate mutase; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.801
KXI13238.1
Pyruvate synthase; KEGG: cdc:CD196_2523 0. nifJ; pyruvate-flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
    
 0.754
xpt
Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.
    
  0.744
KXI12246.1
Putative aspartate transaminase.
 
   
  0.737
KXI13964.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.592
Your Current Organism:
Peptostreptococcus anaerobius
NCBI taxonomy Id: 1261
Other names: ATCC 27337, CCUG 7835, CIP 104411, DSM 2949, LMG 15865, LMG:15865, NCTC 11460, P. anaerobius, Streptococcus anaerob, Streptococcus anaerobius, VPI 4330
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