STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXI13721.1Metallo-beta-lactamase domain protein; KEGG: zga:zobellia_1566 7.8e-05 metallohydrolase; Psort location: Cytoplasmic, score: 7.50. (286 aa)    
Predicted Functional Partners:
KXI11590.1
ComEC/Rec2-like protein; KEGG: apb:SAR116_0501 3.9e-10 DNA uptake protein ComEC K02238; Psort location: CytoplasmicMembrane, score: 10.00.
     0.937
cinA
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 1.6e-17 fadD; long-chain-fatty-acid--CoA ligase K03743; Psort location: Cytoplasmic, score: 7.50; Belongs to the CinA family.
      
 0.497
KXI13722.1
ThiF family protein; KEGG: bpb:bpr_I2644 1.1e-49 thiF; thiamine biosynthesis protein ThiF; Psort location: Cytoplasmic, score: 9.97.
       0.475
birA
biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
 
   
 0.473
comEA
comEA protein; KEGG: hor:Hore_06940 1.7e-10 glycogen/starch synthase K00703; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.472
KXI14727.1
comF family protein; KEGG: rme:Rmet_0258 6.8e-20 gntX; putative amidophosphoribosyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.428
KXI14405.1
DNA protecting protein DprA.
  
  
 0.428
KXI11426.1
Bacterial type II secretion system protein F domain protein; KEGG: pfe:PSF113_5005 4.5e-39 pilC; protein PilC K02653; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.401
ribBA
GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
 0.401
Your Current Organism:
Peptostreptococcus anaerobius
NCBI taxonomy Id: 1261
Other names: ATCC 27337, CCUG 7835, CIP 104411, DSM 2949, LMG 15865, LMG:15865, NCTC 11460, P. anaerobius, Streptococcus anaerob, Streptococcus anaerobius, VPI 4330
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