STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msbA_4ABC transporter, ATP-binding protein; KEGG: ssr:SALIVB_0968 1.2e-226 lipid A export ATP-binding/permease msbA K06147; Psort location: CytoplasmicMembrane, score: 10.00. (581 aa)    
Predicted Functional Partners:
KXI13780.1
Cobalt transport protein; KEGG: sap:Sulac_1647 3.4e-05 monosaccharide-transporting ATPase K02006; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.912
KXI13781.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.898
KXI10608.1
KEGG: cdl:CDR20291_0680 1.5e-93 amino acid ABC transporter ATP-binding protein; K02028 polar amino acid transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
 
     
0.892
KXI13784.1
Transcriptional regulator, TetR family; KEGG: dat:HRM2_17590 1.1e-07 ABC-type molybdate/tungstate transporter ATP binding protein (ATPase); Psort location: Cytoplasmic, score: 7.50.
 
     0.867
ykoD_5
KEGG: ssr:SALIVB_0972 1.2e-148 putative ABC transporter ATP-binding protein SMU_1934c K02006; Psort location: CytoplasmicMembrane, score: 8.78.
  
 
0.838
KXI13782.1
ABC transporter, ATP-binding protein; KEGG: ssr:SALIVB_0969 1.3e-215 lipid A export ATP-binding/permease msbA K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
    
0.834
KXI13481.1
KEGG: sgg:SGGBAA2069_c11630 2.1e-96 putative ABC transporter ATP-binding protein K02003; Psort location: CytoplasmicMembrane, score: 8.78.
 
     
0.826
ykoD_6
KEGG: snc:HMPREF0837_11109 1.9e-95 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 9.96.
 
 
 
0.801
KXI10982.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.663
ecfT_3
Cobalt transport protein; KEGG: sgg:SGGBAA2069_c22910 4.5e-05 cbiQ; cobalt import ATP-binding/permease K02008; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.627
Your Current Organism:
Peptostreptococcus anaerobius
NCBI taxonomy Id: 1261
Other names: ATCC 27337, CCUG 7835, CIP 104411, DSM 2949, LMG 15865, LMG:15865, NCTC 11460, P. anaerobius, Streptococcus anaerob, Streptococcus anaerobius, VPI 4330
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