STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXI13796.1KEGG: efc:EFAU004_01151 2.3e-35 TatD family hydrolase K03424; Psort location: Cytoplasmic, score: 7.50. (258 aa)    
Predicted Functional Partners:
KXI13795.1
KEGG: cbk:CLL_A2538 4.6e-140 lipid A export ATP-binding/permease protein MsbA K06147; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
 
   0.543
KXI13797.1
3H domain protein; Psort location: Cytoplasmic, score: 7.50.
       0.531
KXI13794.1
Putative cadmium efflux system accessory protein; KEGG: rru:Rru_A1450 9.7e-08 ArsR family transcriptional regulator K03741; Psort location: Cytoplasmic, score: 7.50.
       0.477
rplD
50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.
  
     0.453
Your Current Organism:
Peptostreptococcus anaerobius
NCBI taxonomy Id: 1261
Other names: ATCC 27337, CCUG 7835, CIP 104411, DSM 2949, LMG 15865, LMG:15865, NCTC 11460, P. anaerobius, Streptococcus anaerob, Streptococcus anaerobius, VPI 4330
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.