STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXI13564.1Leucine Rich repeat-containing domain protein; KEGG: ctc:CTC00520 8.4e-13 cwp66 homolog/N-acetylmuramoyl-L-alanine amidase K01446; Psort location: Cellwall, score: 8.97. (151 aa)    
Predicted Functional Partners:
KXI13565.1
Peptidase M16 inactive domain protein; KEGG: bst:GYO_2040 2.1e-64 insulinase, peptidase family M16; Psort location: Cytoplasmic, score: 7.50.
       0.613
KXI13566.1
Peptidase M16 inactive domain protein; KEGG: cst:CLOST_1904 1.5e-125 insulysin, peptidase family m16 (insulinase); Psort location: Cytoplasmic, score: 7.50.
       0.600
engD
GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
       0.517
rsmH
S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
 
     0.447
Your Current Organism:
Peptostreptococcus anaerobius
NCBI taxonomy Id: 1261
Other names: ATCC 27337, CCUG 7835, CIP 104411, DSM 2949, LMG 15865, LMG:15865, NCTC 11460, P. anaerobius, Streptococcus anaerob, Streptococcus anaerobius, VPI 4330
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