STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXI13513.1Acetyltransferase, GNAT family; KEGG: bbb:BIF_01130 1.2e-27 Acetyltransferase; Psort location: Cytoplasmic, score: 7.50. (162 aa)    
Predicted Functional Partners:
KXI14238.1
DNA-binding helix-turn-helix protein; KEGG: apb:SAR116_1185 2.0e-06 transcriptional regulator.
    
 0.617
KXI11632.1
Cupin domain protein; KEGG: apb:SAR116_1185 3.0e-17 transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.606
aroE
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate dehydrogenase family.
    
  0.597
KXI10836.1
Beta-eliminating lyase; KEGG: cpy:Cphy_2181 8.9e-89 threonine aldolase K01620; Psort location: Cytoplasmic, score: 7.50.
 
  
  0.526
ileS
isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.
  
    0.498
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
     
 0.460
ansA
KEGG: rho:RHOM_06580 1.2e-84 L-asparaginase, type I; K01424 L-asparaginase; Psort location: Cytoplasmic, score: 9.97.
  
     0.411
Your Current Organism:
Peptostreptococcus anaerobius
NCBI taxonomy Id: 1261
Other names: ATCC 27337, CCUG 7835, CIP 104411, DSM 2949, LMG 15865, LMG:15865, NCTC 11460, P. anaerobius, Streptococcus anaerob, Streptococcus anaerobius, VPI 4330
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.