STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXI13433.1MATE efflux family protein; KEGG: ssr:SALIVB_2015 1.1e-22 queuine tRNA-ribosyltransferase; Psort location: CytoplasmicMembrane, score: 10.00. (473 aa)    
Predicted Functional Partners:
KXI13434.1
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
 
     0.534
KXI13432.1
Peptidylprolyl isomerase PrsA1 family protein; KEGG: cdg:CDBI1_17125 1.2e-54 foldase lipoprotein; K07533 foldase protein PrsA; Psort location: CytoplasmicMembrane, score: 9.68.
   
   0.516
KXI14858.1
S1 RNA binding domain protein; KEGG: fma:FMG_0826 1.2e-54 fused penicillin tolerance LytB domain-containing protein/30S ribosomal protein S1; K02945 small subunit ribosomal protein S1; K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Psort location: Cytoplasmic, score: 9.97.
   
    0.483
mfd
Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.
       0.466
pth
aminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
       0.440
gap
Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: cdc:CD196_2984 3.8e-145 gapB; glyceraldehyde-3-phosphate dehydrogenase 2; K00134 glyceraldehyde 3-phosphate dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
   
    0.410
gapB
Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: cdl:CDR20291_1662 8.7e-130 gapA; glyceraldehyde-3-phosphate dehydrogenase 1; K00134 glyceraldehyde 3-phosphate dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
   
    0.410
Your Current Organism:
Peptostreptococcus anaerobius
NCBI taxonomy Id: 1261
Other names: ATCC 27337, CCUG 7835, CIP 104411, DSM 2949, LMG 15865, LMG:15865, NCTC 11460, P. anaerobius, Streptococcus anaerob, Streptococcus anaerobius, VPI 4330
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