STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXI13308.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (203 aa)    
Predicted Functional Partners:
KXI13306.1
FMN-binding domain protein; KEGG: dsy:DSY3139 3.5e-13 fumarate reductase flavoprotein subunit; K00244 fumarate reductase flavoprotein subunit; Psort location: Cellwall, score: 9.21.
       0.576
KXI13307.1
FMN-binding domain protein; KEGG: scc:Spico_0350 1.9e-11 flavocytochrome c; K00244 fumarate reductase flavoprotein subunit.
       0.572
KXI13388.1
FMN-binding domain protein; KEGG: dsy:DSY3139 1.7e-07 fumarate reductase flavoprotein subunit; K00244 fumarate reductase flavoprotein subunit.
       0.417
KXI13309.1
Putative cell wall binding repeat 2; KEGG: ctc:CTC00504 1.5e-42 cwp66 homolog/N-acetylmuramoyl-L-alanine amidase K01446; Psort location: Cellwall, score: 9.94.
       0.405
Your Current Organism:
Peptostreptococcus anaerobius
NCBI taxonomy Id: 1261
Other names: ATCC 27337, CCUG 7835, CIP 104411, DSM 2949, LMG 15865, LMG:15865, NCTC 11460, P. anaerobius, Streptococcus anaerob, Streptococcus anaerobius, VPI 4330
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