STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXI13132.1GA module; KEGG: cbj:H04402_00392 1.3e-41 N-acetylmuramoyl-L-alanine amidase; Psort location: Cellwall, score: 9.21. (1172 aa)    
Predicted Functional Partners:
KXI13988.1
Putative methyl-coenzyme M reductase, alpha subunit; KEGG: fma:FMG_0035 1.2e-41 cell wall-associated serine proteinase; K01361 lactocepin; Psort location: Cellwall, score: 9.21.
 
0.834
KXI11842.1
Putative cell wall binding repeat 2; KEGG: ctc:CTC02092 1.4e-11 N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase; Psort location: CytoplasmicMembrane, score: 8.28.
  
  
  0.822
KXI14221.1
Hypothetical protein; KEGG: fma:FMG_0035 5.1e-10 cell wall-associated serine proteinase; K01361 lactocepin; Psort location: Cytoplasmic, score: 7.50.
  
 0.774
KXI13889.1
LPXTG-motif protein cell wall anchor domain protein; Psort location: Cellwall, score: 9.98.
  
 0.774
KXI12711.1
Repeat protein; Psort location: Cellwall, score: 9.21.
  
 0.774
KXI11640.1
Hypothetical protein; KEGG: fma:FMG_0035 1.7e-10 cell wall-associated serine proteinase; K01361 lactocepin; Psort location: Cellwall, score: 9.25.
  
 0.774
KXI13131.1
GA module; KEGG: ctc:CTC00504 6.9e-48 cwp66 homolog/N-acetylmuramoyl-L-alanine amidase K01446; Psort location: Cellwall, score: 9.21.
 
    
0.611
KXI13864.1
Leucine Rich repeat-containing domain protein; KEGG: bjs:MY9_3612 8.5e-37 N-acetylmuramoyl-L-alanine amidase CwlB; K01448 N-acetylmuramoyl-L-alanine amidase.
 
  
0.592
KXI13987.1
Putative septum site-determining protein MinC; KEGG: bjs:MY9_3612 8.2e-43 N-acetylmuramoyl-L-alanine amidase CwlB; K01448 N-acetylmuramoyl-L-alanine amidase; Psort location: Cellwall, score: 9.94.
 
  
0.589
secY
Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
    
   0.576
Your Current Organism:
Peptostreptococcus anaerobius
NCBI taxonomy Id: 1261
Other names: ATCC 27337, CCUG 7835, CIP 104411, DSM 2949, LMG 15865, LMG:15865, NCTC 11460, P. anaerobius, Streptococcus anaerob, Streptococcus anaerobius, VPI 4330
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