STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXI13030.1HAD hydrolase, family IA, variant 1; KEGG: lml:lmo4a_0646 2.6e-34 HAD-superfamily hydrolase K07025; Psort location: Cytoplasmic, score: 7.50. (234 aa)    
Predicted Functional Partners:
KXI11269.1
KEGG: eha:Ethha_0637 4.5e-94 riboflavin biosynthesis protein RibD K11752; Psort location: Cytoplasmic, score: 7.50.
    
 0.938
cinA
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 1.6e-17 fadD; long-chain-fatty-acid--CoA ligase K03743; Psort location: Cytoplasmic, score: 7.50; Belongs to the CinA family.
    
  0.911
KXI14432.1
KEGG: cdg:CDBI1_11280 5.4e-233 inosine 5-monophosphate dehydrogenase K00088; Psort location: Cytoplasmic, score: 7.50.
   
 0.905
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
    
  0.903
rph
tRNA nucleotidyltransferase; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.
    
  0.824
KXI13462.1
KEGG: cdc:CD196_0498 7.8e-161 phosphoribulokinase/uridine kinase; K00876 uridine kinase; Psort location: Cytoplasmic, score: 9.97.
  
 
  0.795
KXI13383.1
KEGG: cha:CHAB381_1759 6.7e-187 aldehyde dehydrogenase B; Psort location: Cytoplasmic, score: 9.97.
  
 
  0.738
KXI14161.1
Channel protein, MIP family; KEGG: hiq:CGSHiGG_06740 7.6e-28 glpQ; glycerophosphodiester phosphodiesterase K02440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
   0.676
KXI13031.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.581
KXI13096.1
KEGG: scf:Spaf_1383 1.4e-115 glpQ; glycerophosphodiester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
  0.529
Your Current Organism:
Peptostreptococcus anaerobius
NCBI taxonomy Id: 1261
Other names: ATCC 27337, CCUG 7835, CIP 104411, DSM 2949, LMG 15865, LMG:15865, NCTC 11460, P. anaerobius, Streptococcus anaerob, Streptococcus anaerobius, VPI 4330
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