STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXI13041.1Radical SAM domain protein; KEGG: dat:HRM2_14950 3.3e-50 hemN1; HemN1 protein; Psort location: Cytoplasmic, score: 9.97. (301 aa)    
Predicted Functional Partners:
KXI13040.1
Aminotransferase, class I/II; KEGG: cdf:CD3664 8.1e-143 amino acid aminotransferase K00837; Psort location: Cytoplasmic, score: 9.97.
  
    0.515
KXI14186.1
Hypothetical protein; KEGG: awo:Awo_c27210 9.9e-106 SAM dependent methyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.428
KXI13039.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.428
rpsF
Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
       0.407
KXI13037.1
Selenium metabolism protein YedF; KEGG: drm:Dred_1242 6.2e-33 SirA family protein; K04085 tRNA 2-thiouridine synthesizing protein A; Psort location: Cytoplasmic, score: 7.50; Belongs to the sulfur carrier protein TusA family.
       0.402
KXI13038.1
Hypothetical protein; KEGG: tsh:Tsac_0540 7.6e-06 radical SAM protein; K01012 biotin synthetase.
       0.401
Your Current Organism:
Peptostreptococcus anaerobius
NCBI taxonomy Id: 1261
Other names: ATCC 27337, CCUG 7835, CIP 104411, DSM 2949, LMG 15865, LMG:15865, NCTC 11460, P. anaerobius, Streptococcus anaerob, Streptococcus anaerobius, VPI 4330
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.