STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXI13061.1CobW/P47K family protein; KEGG: reh:H16_A0195 5.0e-24 h16_A0195; G3E family GTPase; Psort location: Cytoplasmic, score: 7.50. (346 aa)    
Predicted Functional Partners:
KXI13063.1
TIGR03943 family protein; Psort location: CytoplasmicMembrane, score: 9.35.
 
     0.782
map
Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
  
 
   0.768
KXI13062.1
Putative permease; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
0.710
rpsN1
Ribosomal protein S14p/S29e; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
  
 
 0.629
KXI10912.1
Hypothetical protein; KEGG: cbf:CLI_1576 3.2e-22 methylcobalamin:coenzyme M methyltransferase; Psort location: Cytoplasmic, score: 7.50; Belongs to the uroporphyrinogen decarboxylase family.
    0.597
KXI13055.1
ABC transporter, substrate-binding protein; KEGG: saj:SaurJH9_2430 4.4e-48 ribulose-phosphate 3-epimerase K01783; Psort location: CytoplasmicMembrane, score: 9.68; Belongs to the bacterial solute-binding protein 9 family.
  
  
 0.588
rpmB
Ribosomal protein L28; KEGG: apb:SAR116_1905 0.0023 50S ribosomal protein L28 K02902; Psort location: Cytoplasmic, score: 9.67; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.551
KXI10320.1
ABC transporter, substrate-binding protein; KEGG: saj:SaurJH9_2430 3.5e-11 ribulose-phosphate 3-epimerase K01783; Psort location: CytoplasmicMembrane, score: 9.81; Belongs to the bacterial solute-binding protein 9 family.
  
  
 0.537
KXI10909.1
Methyltransferase, MtaA/CmuA family; KEGG: cby:CLM_1727 3.5e-62 uroporphyrinogen decarboxylase family protein; K01599 uroporphyrinogen decarboxylase; Psort location: Cytoplasmic, score: 7.50.
 
    0.512
metH
KEGG: toc:Toce_1078 6.3e-40 methyltransferase cognate corrinoid protein; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.490
Your Current Organism:
Peptostreptococcus anaerobius
NCBI taxonomy Id: 1261
Other names: ATCC 27337, CCUG 7835, CIP 104411, DSM 2949, LMG 15865, LMG:15865, NCTC 11460, P. anaerobius, Streptococcus anaerob, Streptococcus anaerobius, VPI 4330
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