STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXI12591.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (117 aa)    
Predicted Functional Partners:
KXI10969.1
23S rRNA (uracil-5-)-methyltransferase RumA; KEGG: cdf:CD0406 1.2e-164 tRNA (Uracil-5-)-methyltransferase; K00599; Psort location: Cytoplasmic, score: 7.50; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
 
      0.899
KXI12592.1
Hypothetical protein.
       0.714
KXI12593.1
Methyltransferase domain protein; Psort location: Cytoplasmic, score: 7.50.
       0.714
KXI12590.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.642
Your Current Organism:
Peptostreptococcus anaerobius
NCBI taxonomy Id: 1261
Other names: ATCC 27337, CCUG 7835, CIP 104411, DSM 2949, LMG 15865, LMG:15865, NCTC 11460, P. anaerobius, Streptococcus anaerob, Streptococcus anaerobius, VPI 4330
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.