STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXI11875.1Hypothetical protein. (85 aa)    
Predicted Functional Partners:
ispE
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
       0.588
KXI11868.1
KEGG: hhd:HBHAL_1063 1.6e-59 purR; purine operon repressor K09685; Psort location: Cytoplasmic, score: 9.97.
 
     0.536
cggR
Sugar-binding domain protein; KEGG: cpr:CPR_1160 7.8e-16 citrate lyase regulator K00863; Psort location: Cytoplasmic, score: 7.50.
  
     0.495
KXI13045.1
Hypothetical protein; KEGG: bcc:BCc_287 0.0064 cyoE; CyoE K02301; Psort location: CytoplasmicMembrane, score: 10.00.
   
    0.493
racE
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
       0.483
KXI11877.1
FCD domain protein; KEGG: pfe:PSF113_4057 1.0e-25 family transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
       0.479
KXI11874.1
6-phospho-beta-glucosidase; KEGG: sub:SUB1579 3.5e-190 6-phospho-beta-glucosidase K01223; Psort location: Cytoplasmic, score: 9.97; Belongs to the glycosyl hydrolase 1 family.
       0.474
KXI11879.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.470
rnr
Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.
  
    0.468
tilS
tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.
       0.456
Your Current Organism:
Peptostreptococcus anaerobius
NCBI taxonomy Id: 1261
Other names: ATCC 27337, CCUG 7835, CIP 104411, DSM 2949, LMG 15865, LMG:15865, NCTC 11460, P. anaerobius, Streptococcus anaerob, Streptococcus anaerobius, VPI 4330
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.