STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXI11879.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (137 aa)    
Predicted Functional Partners:
tilS
tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.
 
     0.846
ispE
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
  
    0.821
racE
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
  
    0.817
KXI11877.1
FCD domain protein; KEGG: pfe:PSF113_4057 1.0e-25 family transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
 
     0.799
argS
arginine--tRNA ligase; KEGG: cdf:CD0711 2.5e-228 argS; arginyl-tRNA synthetase K01887; Psort location: Cytoplasmic, score: 9.97.
  
    0.671
ftsH
ATP-dependent metallopeptidase HflB; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
       0.626
KXI10593.1
Tetratricopeptide repeat protein; KEGG: tet:TTHERM_00391570 5.7e-06 DNA polymerase family B containing protein K02350; Psort location: Cytoplasmic, score: 7.50.
  
    0.618
KXI14818.1
Coproporphyrinogen dehydrogenase HemZ; KEGG: cdc:CD196_2583 4.8e-145 coproporphyrinogen III oxidase; K02495 oxygen-independent coproporphyrinogen III oxidase; Psort location: Cytoplasmic, score: 9.97.
  
    0.567
KXI14256.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.520
KXI13050.1
DnaD domain protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.514
Your Current Organism:
Peptostreptococcus anaerobius
NCBI taxonomy Id: 1261
Other names: ATCC 27337, CCUG 7835, CIP 104411, DSM 2949, LMG 15865, LMG:15865, NCTC 11460, P. anaerobius, Streptococcus anaerob, Streptococcus anaerobius, VPI 4330
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