STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXI11773.1Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (60 aa)    
Predicted Functional Partners:
KXI13238.1
Pyruvate synthase; KEGG: cdc:CD196_2523 0. nifJ; pyruvate-flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.950
rnfB
Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
    
  0.922
gltD_1
KEGG: cni:Calni_1870 1.0e-87 fad-dependent pyridine nucleotide-disulfide oxidoreductase; K15022 formate dehydrogenase beta subunit; Psort location: Cytoplasmic, score: 9.97.
    
 0.847
KXI10629.1
4Fe-4S binding domain protein; KEGG: apv:Apar_0411 5.6e-151 ferredoxin hydrogenase; Psort location: Cytoplasmic, score: 7.50.
    
 0.777
purB
Adenylosuccinate lyase; KEGG: ccl:Clocl_1803 1.4e-179 adenylosuccinate lyase; K01756 adenylosuccinate lyase; Psort location: Cytoplasmic, score: 7.50.
    
  0.438
KXI11772.1
KEGG: cdf:CD0179 4.7e-186 gluD; NAD-specific glutamate dehydrogenase K00260; Psort location: Cytoplasmic, score: 9.97; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
  0.434
KXI14054.1
Putative ferredoxin hydrogenase HydA1; KEGG: eha:Ethha_2293 4.5e-204 hydrogenase, Fe-only; K00336 NADH-quinone oxidoreductase subunit G; Psort location: Cytoplasmic, score: 9.97.
    
 0.430
pyrC
Amidohydrolase family protein; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
    
  0.418
Your Current Organism:
Peptostreptococcus anaerobius
NCBI taxonomy Id: 1261
Other names: ATCC 27337, CCUG 7835, CIP 104411, DSM 2949, LMG 15865, LMG:15865, NCTC 11460, P. anaerobius, Streptococcus anaerob, Streptococcus anaerobius, VPI 4330
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