STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXI11793.1Twitching motility protein; KEGG: apb:SAR116_2526 7.0e-57 type II secretion PilT K02669; Psort location: Cytoplasmic, score: 9.97. (355 aa)    
Predicted Functional Partners:
KXI11426.1
Bacterial type II secretion system protein F domain protein; KEGG: pfe:PSF113_5005 4.5e-39 pilC; protein PilC K02653; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.890
KXI11792.1
Hypothetical protein; KEGG: faa:HMPREF0389_00410 0.0010 prepilin peptidase; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
KXI11427.1
Type II/IV secretion system protein; KEGG: cco:CCC13826_1231 9.1e-64 L(+)-tartrate dehydratase subunit beta (L-TTD beta) K02454; Psort location: Cytoplasmic, score: 9.97.
 
  
0.602
KXI11794.1
Hypothetical protein.
       0.481
KXI11795.1
ABC transporter, ATP-binding protein; KEGG: cle:Clole_0679 1.0e-64 phosphonate-transporting ATPase K02003; Psort location: CytoplasmicMembrane, score: 9.99.
       0.481
KXI11796.1
Efflux ABC transporter, permease protein; KEGG: ljf:FI9785_1760 3.0e-08 ABC transporter ATPase/permease K02003:K02004; Psort location: CytoplasmicMembrane, score: 10.00.
       0.481
KXI13238.1
Pyruvate synthase; KEGG: cdc:CD196_2523 0. nifJ; pyruvate-flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
  
    0.478
lytC_27
Putative cell wall binding repeat 2; KEGG: cbj:H04402_00392 8.7e-24 N-acetylmuramoyl-L-alanine amidase; Psort location: CytoplasmicMembrane, score: 8.28.
     
 0.469
KXI12449.1
Hypothetical protein.
     
 0.419
tyrA
Chorismate mutase; KEGG: cpe:CPE0698 1.3e-14 chorismate mutase; K04516 chorismate mutase; Psort location: Cytoplasmic, score: 7.50.
     
 0.405
Your Current Organism:
Peptostreptococcus anaerobius
NCBI taxonomy Id: 1261
Other names: ATCC 27337, CCUG 7835, CIP 104411, DSM 2949, LMG 15865, LMG:15865, NCTC 11460, P. anaerobius, Streptococcus anaerob, Streptococcus anaerobius, VPI 4330
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