STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
grdAHypothetical protein; KEGG: cdc:CD196_2194 5.6e-16 grdA; glycine/sarcosine/betaine reductase complex protein A. (44 aa)    
Predicted Functional Partners:
grdA1
KEGG: cdc:CD196_2194 3.0e-42 grdA; glycine/sarcosine/betaine reductase complex protein A.
 
  
  0.967
KXI11604.1
Putative glycine reductase, selenoprotein B; KEGG: cdg:CDBI1_11360 9.7e-147 glycine reductase complex component B gamma subunit; K10670 glycine reductase; Psort location: Cytoplasmic, score: 7.50.
 
     0.941
KXI11605.1
Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase domain protein; KEGG: cst:CLOST_1113 3.1e-31 grdB; glycine reductase component b subunit gamma K10670; Psort location: Cytoplasmic, score: 7.50.
 
     0.926
KXI11606.1
KEGG: cdf:CD2349 8.0e-223 grdC; glycine/sarcosine/betaine reductase complex component C subunit beta; K10670 glycine reductase; K10671 sarcosine reductase K10672; Psort location: Cytoplasmic, score: 7.50.
 
     0.880
KXI11607.1
Fatty acid/phospholipid synthesis protein PlsX; KEGG: cdf:CD2348 3.0e-136 grdD; glycine/sarcosine/betaine reductase complex component C subunit alpha K10670; Psort location: Cytoplasmic, score: 7.50.
 
     0.878
KXI11600.1
Glycine reductase, subunit ABC; KEGG: cdl:CDR20291_2241 1.5e-191 grdE; glycine reductase complex component B subunits alpha/beta; K10670 glycine reductase; Psort location: Cytoplasmic, score: 9.97.
 
     0.827
KXI11597.1
GrdX family protein.
 
     0.819
KXI11601.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.558
KXI11599.1
Thioredoxin; KEGG: cdb:CDBH8_2368 1.3e-14 trxC; thioredoxin K03671; Psort location: Cytoplasmic, score: 7.50; Belongs to the thioredoxin family.
 
     0.438
Your Current Organism:
Peptostreptococcus anaerobius
NCBI taxonomy Id: 1261
Other names: ATCC 27337, CCUG 7835, CIP 104411, DSM 2949, LMG 15865, LMG:15865, NCTC 11460, P. anaerobius, Streptococcus anaerob, Streptococcus anaerobius, VPI 4330
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