STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ydcVABC transporter, permease protein; KEGG: aoe:Clos_2538 4.9e-81 ornithine carbamoyltransferase K11070; Psort location: CytoplasmicMembrane, score: 10.00. (259 aa)    
Predicted Functional Partners:
KXI11634.1
Putative spermidine/putrescine ABC transporter, permease protein PotB; KEGG: ebe:B21_01131 1.6e-50 potB; potB, subunit of putrescine/spermidine ABC transporter K11071; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.999
potD
KEGG: ebe:B21_01129 4.8e-58 potD; potD, subunit of putrescine/spermidine ABC transporter K11069; Psort location: Cytoplasmic, score: 7.50.
 
 0.999
potA
Spermidine/putrescine ABC transporter, ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 0.998
KXI11632.1
Cupin domain protein; KEGG: apb:SAR116_1185 3.0e-17 transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
       0.719
ugpC
ABC transporter, ATP-binding protein; KEGG: gth:Geoth_3196 7.5e-124 glycerol-3-phosphate-transporting ATPase K10112; Psort location: CytoplasmicMembrane, score: 9.96; Belongs to the ABC transporter superfamily.
  
 0.589
fbpC_1
ABC transporter, ATP-binding protein; KEGG: cle:Clole_0451 6.6e-61 Fe(3+)-transporting ATPase K02018; Psort location: CytoplasmicMembrane, score: 9.96.
  
  0.533
KXI11775.1
S4 domain protein; KEGG: mct:MCR_0729 5.1e-06 heat shock protein 15 K04762; Psort location: Cytoplasmic, score: 7.50.
   
    0.493
KXI11637.1
KEGG: lml:lmo4a_2594 1.1e-29 N-acetylmuramoyl-L-alanine amidase family protein.
       0.484
modB
Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
  
  0.469
ecfA2
Cobalt ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
   
    0.461
Your Current Organism:
Peptostreptococcus anaerobius
NCBI taxonomy Id: 1261
Other names: ATCC 27337, CCUG 7835, CIP 104411, DSM 2949, LMG 15865, LMG:15865, NCTC 11460, P. anaerobius, Streptococcus anaerob, Streptococcus anaerobius, VPI 4330
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