STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXI11427.1Type II/IV secretion system protein; KEGG: cco:CCC13826_1231 9.1e-64 L(+)-tartrate dehydratase subunit beta (L-TTD beta) K02454; Psort location: Cytoplasmic, score: 9.97. (419 aa)    
Predicted Functional Partners:
KXI11426.1
Bacterial type II secretion system protein F domain protein; KEGG: pfe:PSF113_5005 4.5e-39 pilC; protein PilC K02653; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.999
KXI12449.1
Hypothetical protein.
  
 0.973
KXI11477.1
LysM domain protein.
    
   0.689
comEA
comEA protein; KEGG: hor:Hore_06940 1.7e-10 glycogen/starch synthase K00703; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.686
KXI14405.1
DNA protecting protein DprA.
 
  
 0.646
KXI11425.1
Hypothetical protein.
       0.642
KXI13238.1
Pyruvate synthase; KEGG: cdc:CD196_2523 0. nifJ; pyruvate-flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
   
   0.617
KXI11793.1
Twitching motility protein; KEGG: apb:SAR116_2526 7.0e-57 type II secretion PilT K02669; Psort location: Cytoplasmic, score: 9.97.
 
  
0.602
cinA
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 1.6e-17 fadD; long-chain-fatty-acid--CoA ligase K03743; Psort location: Cytoplasmic, score: 7.50; Belongs to the CinA family.
     
 0.539
KXI14631.1
KEGG: shn:Shewana3_3590 2.7e-12 single-strand binding protein K03111; Psort location: Cytoplasmic, score: 9.67.
  
  
 0.517
Your Current Organism:
Peptostreptococcus anaerobius
NCBI taxonomy Id: 1261
Other names: ATCC 27337, CCUG 7835, CIP 104411, DSM 2949, LMG 15865, LMG:15865, NCTC 11460, P. anaerobius, Streptococcus anaerob, Streptococcus anaerobius, VPI 4330
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.