STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bmr3Transporter, major facilitator family protein; KEGG: ase:ACPL_1277 1.1e-51 EmrB/QacA subfamily drug resistance transporter; Psort location: CytoplasmicMembrane, score: 10.00. (480 aa)    
Predicted Functional Partners:
tyrA
Chorismate mutase; KEGG: cpe:CPE0698 1.3e-14 chorismate mutase; K04516 chorismate mutase; Psort location: Cytoplasmic, score: 7.50.
   
 
 0.845
KXI11136.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.773
KXI11134.1
Putative aminopeptidase II; KEGG: cdl:CDR20291_3433 9.6e-140 aminopeptidase; K01269 aminopeptidase; Psort location: Cytoplasmic, score: 7.50.
  
    0.738
KXI13894.1
KEGG: ppy:PPE_01619 7.2e-206 PTS system fructose-specific EIIBBC component (EIIBBC-Fru); K02768 PTS system, fructose-specific IIA component; K02769 PTS system, fructose-specific IIB component K02770; Psort location: CytoplasmicMembrane, score: 10.00.
    
 
 0.575
fadD
AMP-binding enzyme; KEGG: csh:Closa_3006 4.8e-106 AMP-dependent synthetase and ligase; K00666 fatty-acyl-CoA synthase; Psort location: Cytoplasmic, score: 9.67.
  
  
 0.549
msrA
methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
     
 0.533
KXI13559.1
Putative PTS system glucose-specific EIICBA component; KEGG: cbe:Cbei_0751 5.1e-228 PTS system glucose subfamily transporter subunit IIA; K02763 PTS system, D-glucosamine-specific IIA component; K02764 PTS system, D-glucosamine-specific IIB component K02765; Psort location: CytoplasmicMembrane, score: 10.00.
   
  
 0.530
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
     
 0.528
hom
KEGG: hmo:HM1_1936 8.1e-95 thrA; homoserine dehydrogenase; K00003 homoserine dehydrogenase; Psort location: Cytoplasmic, score: 7.50.
   
  0.524
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
     
 0.524
Your Current Organism:
Peptostreptococcus anaerobius
NCBI taxonomy Id: 1261
Other names: ATCC 27337, CCUG 7835, CIP 104411, DSM 2949, LMG 15865, LMG:15865, NCTC 11460, P. anaerobius, Streptococcus anaerob, Streptococcus anaerobius, VPI 4330
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