STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXI11048.1DNA binding domain, excisionase family; Psort location: Cytoplasmic, score: 7.50. (67 aa)    
Predicted Functional Partners:
KXI11046.1
Site-specific recombinase, phage integrase family; KEGG: bsr:I33_1800 3.8e-14 xerC; ATP-dependent protease HslV K03733; Belongs to the 'phage' integrase family.
 
   
 0.900
KXI11051.1
KEGG: efc:EFAU004_02773 3.8e-17 DNA-directed RNA polymerase specialized sigma subunit; Psort location: Cytoplasmic, score: 7.50.
  
     0.720
KXI11053.1
DNA-binding helix-turn-helix protein; KEGG: mla:Mlab_1603 1.8e-05 adenine deaminase K01486; Psort location: Cytoplasmic, score: 7.50.
  
     0.718
KXI11050.1
Hypothetical protein; KEGG: smb:smi_1339 2.0e-27 pnpA; polyribonucleotide nucleotidyltransferase.
  
     0.676
KXI11054.1
Putative translation elongation factor G; KEGG: efu:HMPREF0351_10054 3.6e-60 fusA; protein-synthesizing GTPase K02355; Psort location: Cytoplasmic, score: 9.97.
  
     0.593
KXI11047.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.584
KXI11049.1
Hypothetical protein.
       0.495
Your Current Organism:
Peptostreptococcus anaerobius
NCBI taxonomy Id: 1261
Other names: ATCC 27337, CCUG 7835, CIP 104411, DSM 2949, LMG 15865, LMG:15865, NCTC 11460, P. anaerobius, Streptococcus anaerob, Streptococcus anaerobius, VPI 4330
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.