STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXI10816.1Hypothetical protein; KEGG: ssr:SALIVB_2089 1.3e-30 tyrosyl-tRNA synthetase; Psort location: CytoplasmicMembrane, score: 10.00. (292 aa)    
Predicted Functional Partners:
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
    
  0.701
KXI10817.1
Putative MORN repeat protein; KEGG: tgo:TGME49_110440 4.5e-30 phosphatidylinositol-4-phosphate 5-kinase, putative.
       0.527
KXI10815.1
VanW-like protein; KEGG: sam:MW1262 0.0030 femB; FemB protein; K11695 peptidoglycan pentaglycine glycine transferase (the fourth and fifth glycine); Psort location: CytoplasmicMembrane, score: 9.87.
       0.497
Your Current Organism:
Peptostreptococcus anaerobius
NCBI taxonomy Id: 1261
Other names: ATCC 27337, CCUG 7835, CIP 104411, DSM 2949, LMG 15865, LMG:15865, NCTC 11460, P. anaerobius, Streptococcus anaerob, Streptococcus anaerobius, VPI 4330
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