STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXI10844.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (106 aa)    
Predicted Functional Partners:
nifU
SUF system FeS assembly protein, NifU family; KEGG: pfe:PSF113_1013 8.4e-10 iscU; protein IscU K04488; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.846
KXI10645.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
    
 
 0.791
KXI10612.1
KEGG: cdf:CD0753 1.0e-119 iscS1; cysteine desulfurase K04487; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.703
KXI13886.1
SufB/sufD domain protein; KEGG: apb:SAR116_0016 2.2e-11 Fe-S center production/stability protein SufD K09015.
  
 
 0.602
KXI13887.1
KEGG: suc:ECTR2_773 1.0e-133 sufB; feS assembly protein SufB K09014; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.602
yurY
FeS assembly ATPase SufC; KEGG: ppo:PPM_1514 3.3e-66 yurY; phosphate import ATP-binding protein pstB Phosphate-transporting ATPase; ABC phosphate transporter K09013; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.595
KXI13238.1
Pyruvate synthase; KEGG: cdc:CD196_2523 0. nifJ; pyruvate-flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.587
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
     
 0.568
KXI10842.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.533
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
       0.533
Your Current Organism:
Peptostreptococcus anaerobius
NCBI taxonomy Id: 1261
Other names: ATCC 27337, CCUG 7835, CIP 104411, DSM 2949, LMG 15865, LMG:15865, NCTC 11460, P. anaerobius, Streptococcus anaerob, Streptococcus anaerobius, VPI 4330
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.