STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssuBABC transporter, ATP-binding protein; KEGG: mct:MCR_1207 4.5e-46 ABC transporter ATPase K15600; Psort location: CytoplasmicMembrane, score: 9.99. (238 aa)    
Predicted Functional Partners:
cmpB
KEGG: apb:SAR116_1967 5.2e-29 ABC transporter permease K15599; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.995
KXI10854.1
NMT1/THI5-like protein; KEGG: abu:Abu_1637 1.3e-12 two-component sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 9.55.
 
 0.990
KXI10856.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.928
KXI14318.1
Efflux ABC transporter, permease protein; KEGG: efl:EF62_0750 4.0e-54 permease family protein K02004; Psort location: CytoplasmicMembrane, score: 10.00.
 
      0.891
KXI14175.1
KEGG: bra:BRADO5373 1.3e-11 ABC transporter permease K02050; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.843
KXI14174.1
Hypothetical protein.
  
 
 0.812
KXI14474.1
Putative mutacin ABC transporter, ATP-binding protein MutF; KEGG: ssr:SALIVB_0674 2.5e-59 sivF; sal9 lantibiotic transport ATP-binding protein K09687; Psort location: CytoplasmicMembrane, score: 8.78.
 
   
 
0.604
modB
Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
   
 0.521
mutS
DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.
       0.506
miaA
tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.
       0.467
Your Current Organism:
Peptostreptococcus anaerobius
NCBI taxonomy Id: 1261
Other names: ATCC 27337, CCUG 7835, CIP 104411, DSM 2949, LMG 15865, LMG:15865, NCTC 11460, P. anaerobius, Streptococcus anaerob, Streptococcus anaerobius, VPI 4330
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