STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXI10594.1Cytochrome C biogenesis protein transmembrane region; KEGG: ccu:Ccur_04460 5.1e-47 methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase; K12267 peptide methionine sulfoxide reductase msrA/msrB; Psort location: CytoplasmicMembrane, score: 10.00. (441 aa)    
Predicted Functional Partners:
msrA
methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
 0.909
KXI10593.1
Tetratricopeptide repeat protein; KEGG: tet:TTHERM_00391570 5.7e-06 DNA polymerase family B containing protein K02350; Psort location: Cytoplasmic, score: 7.50.
  
    0.839
KXI10592.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
    0.783
dsbE
Redoxin family protein; KEGG: aca:ACP_1678 2.7e-10 thiol-disulfide oxidoreductase.
  
  
0.688
KXI11599.1
Thioredoxin; KEGG: cdb:CDBH8_2368 1.3e-14 trxC; thioredoxin K03671; Psort location: Cytoplasmic, score: 7.50; Belongs to the thioredoxin family.
  
 
 0.685
trxA_1
Thioredoxin; KEGG: nwi:Nwi_0051 7.0e-18 thioredoxin K03671; Psort location: Cytoplasmic, score: 9.67; Belongs to the thioredoxin family.
  
 
 0.685
KXI13362.1
KEGG: gth:Geoth_3232 5.1e-189 CoA-disulfide reductase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.604
ywnA
Transcriptional regulator; KEGG: apb:SAR116_0013 0.0027 BadM/Rrf2 family transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
 
     0.578
KXI10591.1
Hypothetical protein; Psort location: Extracellular, score: 8.91.
       0.551
KXI11269.1
KEGG: eha:Ethha_0637 4.5e-94 riboflavin biosynthesis protein RibD K11752; Psort location: Cytoplasmic, score: 7.50.
     
 0.549
Your Current Organism:
Peptostreptococcus anaerobius
NCBI taxonomy Id: 1261
Other names: ATCC 27337, CCUG 7835, CIP 104411, DSM 2949, LMG 15865, LMG:15865, NCTC 11460, P. anaerobius, Streptococcus anaerob, Streptococcus anaerobius, VPI 4330
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