STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yqeYYqeY-like protein; KEGG: efc:EFAU004_01997 8.2e-31 Glutamyl-tRNA(Gln) amidotransferase subunit E K09117; Psort location: Cytoplasmic, score: 7.50. (146 aa)    
Predicted Functional Partners:
rpsU
Ribosomal protein S21; KEGG: sew:SeSA_A3399 1.6e-11 rpsU; 30S ribosomal protein S21 K02970; Psort location: Cytoplasmic, score: 9.97; Belongs to the bacterial ribosomal protein bS21 family.
  
  
 0.978
KXI10521.1
Histidine triad domain protein; KEGG: fnu:FN1873 1.3e-25 bis(5'-nucleosyl)-tetraphosphatase K01518; Psort location: Cytoplasmic, score: 7.50.
       0.638
KXI10517.1
Hypothetical protein; Psort location: Extracellular, score: 8.91.
       0.620
KXI10518.1
Hypothetical protein.
       0.620
rpsO
Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
   
    0.511
KXI10522.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0145 family.
       0.505
rpmE
Ribosomal protein L31; Binds the 23S rRNA.
   
    0.485
KXI10525.1
RNA methyltransferase, RsmE family; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
     
 0.448
KXI10524.1
tRNA methylthiotransferase YqeV; KEGG: cdf:CD2448 8.5e-171 radical SAM superfamily protein; K08070 2-alkenal reductase; Psort location: Cytoplasmic, score: 7.50.
  
    0.437
prmA
Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.
       0.410
Your Current Organism:
Peptostreptococcus anaerobius
NCBI taxonomy Id: 1261
Other names: ATCC 27337, CCUG 7835, CIP 104411, DSM 2949, LMG 15865, LMG:15865, NCTC 11460, P. anaerobius, Streptococcus anaerob, Streptococcus anaerobius, VPI 4330
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.