STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lam_019Hypothetical protein. (170 aa)    
Predicted Functional Partners:
lam_993
Hypothetical protein.
  
     0.763
cpaA
Flp pilus assembly protein, protease CpaA.
  
     0.752
lam_294
Hypothetical protein.
  
     0.751
lam_992
Hypothetical protein.
  
     0.731
lam_1012
Flp pilus assembly protein TadD.
  
     0.723
lam_420
Hypothetical protein.
  
     0.705
lam_846
Hypothetical protein.
  
     0.705
lam_532
Hypothetical protein.
  
     0.704
lam_444
Hypothetical protein.
  
     0.703
lam_526
Hypothetical protein.
  
     0.682
Your Current Organism:
Liberibacter americanus
NCBI taxonomy Id: 1261131
Other names: C. Liberibacter americanus str. Sao Paulo, Candidatus Liberibacter americanus str. Sao Paulo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.