STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lam_131Hypothetical protein. (167 aa)    
Predicted Functional Partners:
lam_058
Inactive metal-dependent protease-like protein.
 
 
 0.974
qRI7
Metal-dependent protease; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
 
 
 0.914
lam_132
Inactivated superfamily I helicase.
 
     0.822
lam_130
Two component sensor histidine kinase protein.
       0.789
recB
ATP-dependent exoDNAse; Belongs to the helicase family. UvrD subfamily.
 
   
 0.781
trxA
Thiol-disulfide isomerase and thioredoxin; Belongs to the thioredoxin family.
       0.544
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
    0.481
sfcA
Malic enzyme.
  
    0.457
polA
DNA polymerase I - 3'-5' exonuclease; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
 
     0.432
sUA5
YrdC/Sua5 family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.
     
 0.427
Your Current Organism:
Liberibacter americanus
NCBI taxonomy Id: 1261131
Other names: C. Liberibacter americanus str. Sao Paulo, Candidatus Liberibacter americanus str. Sao Paulo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.