STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ77448.1Hypothetical protein. (61 aa)    
Predicted Functional Partners:
SFQ77461.1
Putative zincin peptidase.
 
     0.870
SFQ77473.1
MarR family transcriptional regulator, protease production regulatory protein HPr.
 
     0.681
SFQ70558.1
WVELL protein.
  
     0.664
SFQ31019.1
Protein of unknown function.
  
     0.636
SFQ48199.1
Rod shape-determining protein MreD.
  
     0.604
SFQ09566.1
Protein of unknown function.
  
     0.599
SFQ78243.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
  
     0.564
SFQ46613.1
Hypothetical protein.
  
     0.531
SFQ61374.1
8-oxo-dGTP diphosphatase.
  
     0.523
SFQ23570.1
Hypothetical protein.
  
     0.506
Your Current Organism:
Psychrobacillus psychrotolerans
NCBI taxonomy Id: 126156
Other names: Bacillus psychrotolerans, Bacillus psychrotolerans Abd El-Rahman et al. 2002, CIP 107792, DSM 11706, NCIMB 13838, P. psychrotolerans, Psychrobacillus psychrotolerans (Abd El-Rahman et al. 2002) Krishnamurthi et al. 2011, strain 3H1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.