Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFQ34600.1 | hutH | SAMN05421670_1679 | SAMN05421670_1678 | Hypothetical protein. | Histidine ammonia-lyase. | 0.500 |
SFQ34600.1 | hutI | SAMN05421670_1679 | SAMN05421670_1677 | Hypothetical protein. | Imidazolonepropionase. | 0.425 |
SFQ34600.1 | hutU | SAMN05421670_1679 | SAMN05421670_1676 | Hypothetical protein. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.425 |
hutH | SFQ34600.1 | SAMN05421670_1678 | SAMN05421670_1679 | Histidine ammonia-lyase. | Hypothetical protein. | 0.500 |
hutH | hutI | SAMN05421670_1678 | SAMN05421670_1677 | Histidine ammonia-lyase. | Imidazolonepropionase. | 0.994 |
hutH | hutU | SAMN05421670_1678 | SAMN05421670_1676 | Histidine ammonia-lyase. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.999 |
hutI | SFQ34600.1 | SAMN05421670_1677 | SAMN05421670_1679 | Imidazolonepropionase. | Hypothetical protein. | 0.425 |
hutI | hutH | SAMN05421670_1677 | SAMN05421670_1678 | Imidazolonepropionase. | Histidine ammonia-lyase. | 0.994 |
hutI | hutU | SAMN05421670_1677 | SAMN05421670_1676 | Imidazolonepropionase. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.998 |
hutU | SFQ34600.1 | SAMN05421670_1676 | SAMN05421670_1679 | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | Hypothetical protein. | 0.425 |
hutU | hutH | SAMN05421670_1676 | SAMN05421670_1678 | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | Histidine ammonia-lyase. | 0.999 |
hutU | hutI | SAMN05421670_1676 | SAMN05421670_1677 | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | Imidazolonepropionase. | 0.998 |